CRAN Package Check Results for Package pgirmess

Last updated on 2015-09-03 13:46:58.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6.2 3.84 50.56 54.40 NOTE
r-devel-linux-x86_64-debian-gcc 1.6.2 3.95 49.57 53.52 NOTE
r-devel-linux-x86_64-fedora-clang 1.6.2 113.75 NOTE
r-devel-linux-x86_64-fedora-gcc 1.6.2 107.55 NOTE
r-devel-osx-x86_64-clang 1.6.2 95.34 OK
r-devel-windows-ix86+x86_64 1.6.2 14.00 84.00 98.00 NOTE
r-patched-linux-x86_64 1.6.2 4.10 52.00 56.10 OK
r-patched-solaris-sparc 1.6.2 701.00 OK
r-patched-solaris-x86 1.6.2 169.60 OK
r-release-linux-x86_64 1.6.2 4.13 52.39 56.52 OK
r-release-osx-x86_64-mavericks 1.6.2 OK
r-release-windows-ix86+x86_64 1.6.2 17.00 84.00 101.00 OK
r-oldrel-windows-ix86+x86_64 1.6.2 23.00 127.00 150.00 OK

Check Details

Version: 1.6.2
Check: R code for possible problems
Result: NOTE
    CI: no visible global function definition for ‘prop.test’
    PermTest.glm: no visible global function definition for ‘family’
    PermTest.glm: no visible global function definition for ‘anova’
    PermTest.glm: no visible global function definition for ‘terms’
    PermTest.glm: no visible global function definition for ‘formula’
    PermTest.glm: no visible global function definition for ‘update’
    PermTest.lm: no visible global function definition for ‘anova’
    PermTest.lm: no visible global function definition for ‘update’
    PermTest.lme: no visible global function definition for ‘anova’
    PermTest.lme: no visible global function definition for ‘update’
    QGIS2sp: no visible global function definition for ‘read.delim’
    Segments: no visible global function definition for ‘segments’
    classnum: no visible global function definition for ‘nclass.Sturges’
    classnum: no visible global function definition for ‘nclass.FD’
    classnum: no visible global function definition for ‘nclass.scott’
    cormat: no visible global function definition for ‘cor.test’
    correlog: no visible global function definition for ‘dist’
    correlog: no visible global function definition for ‘nclass.Sturges’
    difshannonbio: no visible global function definition for ‘quantile’
    friedmanmc: no visible global function definition for ‘qnorm’
    kruskalmc.default: no visible global function definition for ‘na.omit’
    kruskalmc.default: no visible global function definition for ‘qnorm’
    kruskalmc.formula: no visible global function definition for
     ‘model.frame’
    ks.gof: no visible global function definition for ‘ks.test’
    ks.gof: no visible global function definition for ‘sd’
    pairsrp: no visible global function definition for ‘cor.test’
    pairsrp : panel1: no visible global function definition for ‘points’
    pairsrp : panel1: no visible global function definition for ‘abline’
    pairsrp : panel1: no visible global function definition for ‘lm’
    pairsrp : panel1: no visible global function definition for ‘lines’
    pairsrp : panel1: no visible global function definition for ‘lowess’
    pairsrp : panel2: no visible global function definition for ‘cor.test’
    pairsrp : panel2: no visible global function definition for ‘par’
    pairsrp : panel2: no visible global function definition for ‘grey’
    pairsrp : panel2: no visible global function definition for ‘strwidth’
    pairsrp : panel2: no visible global function definition for ‘text’
    pairsrp: no visible global function definition for ‘pairs’
    pairsrp: no visible binding for global variable ‘points’
    pairsrp: no visible global function definition for ‘strwidth’
    pclig: no visible global function definition for ‘na.omit’
    piankabioboot: no visible global function definition for ‘quantile’
    plot.correlog: no visible global function definition for ‘plot’
    plot.correlog: no visible global function definition for ‘axis’
    plot.correlog: no visible global function definition for ‘points’
    postxt: no visible global function definition for ‘par’
    rmls: no visible global function definition for ‘select.list’
    rwhatbufCat: no visible global function definition for ‘flush.console’
    rwhatbufCat2: no visible global function definition for ‘flush.console’
    rwhatbufNum: no visible global function definition for ‘flush.console’
    selMod.list: no visible global function definition for ‘residuals’
    selMod.list: no visible global function definition for ‘AIC’
    selMod.list: no visible global function definition for ‘logLik’
    selMod.list: no visible global function definition for ‘formula’
    selMod.lm: no visible global function definition for ‘terms’
    selMod.lm: no visible global function definition for ‘update’
    selMod.lm: no visible global function definition for ‘formula’
    selMod.lm: no visible global function definition for ‘anova’
    trans2seg: no visible global function definition for ‘na.omit’
    valchisq: no visible global function definition for ‘chisq.test’
    write.delim: no visible global function definition for ‘write.table’
    Undefined global functions or variables:
     AIC abline anova axis chisq.test cor.test dist family flush.console
     formula grey ks.test lines lm logLik lowess model.frame na.omit
     nclass.FD nclass.Sturges nclass.scott pairs par plot points prop.test
     qnorm quantile read.delim residuals sd segments select.list strwidth
     terms text update write.table
    Consider adding
     importFrom("grDevices", "grey", "nclass.FD", "nclass.Sturges",
     "nclass.scott")
     importFrom("graphics", "abline", "axis", "lines", "pairs", "par",
     "plot", "points", "segments", "strwidth", "text")
     importFrom("stats", "AIC", "anova", "chisq.test", "cor.test", "dist",
     "family", "formula", "ks.test", "lm", "logLik", "lowess",
     "model.frame", "na.omit", "prop.test", "qnorm", "quantile",
     "residuals", "sd", "terms", "update")
     importFrom("utils", "flush.console", "read.delim", "select.list",
     "write.table")
    to your NAMESPACE.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.6.2
Check: R code for possible problems
Result: NOTE
    CI: no visible global function definition for 'prop.test'
    PermTest.glm: no visible global function definition for 'family'
    PermTest.glm: no visible global function definition for 'anova'
    PermTest.glm: no visible global function definition for 'terms'
    PermTest.glm: no visible global function definition for 'formula'
    PermTest.glm: no visible global function definition for 'update'
    PermTest.lm: no visible global function definition for 'anova'
    PermTest.lm: no visible global function definition for 'update'
    PermTest.lme: no visible global function definition for 'anova'
    PermTest.lme: no visible global function definition for 'update'
    QGIS2sp: no visible global function definition for 'read.delim'
    Segments: no visible global function definition for 'segments'
    classnum: no visible global function definition for 'nclass.Sturges'
    classnum: no visible global function definition for 'nclass.FD'
    classnum: no visible global function definition for 'nclass.scott'
    cormat: no visible global function definition for 'cor.test'
    correlog: no visible global function definition for 'dist'
    correlog: no visible global function definition for 'nclass.Sturges'
    difshannonbio: no visible global function definition for 'quantile'
    friedmanmc: no visible global function definition for 'qnorm'
    kruskalmc.default: no visible global function definition for 'na.omit'
    kruskalmc.default: no visible global function definition for 'qnorm'
    kruskalmc.formula: no visible global function definition for
     'model.frame'
    ks.gof: no visible global function definition for 'ks.test'
    ks.gof: no visible global function definition for 'sd'
    pairsrp: no visible global function definition for 'cor.test'
    pairsrp : panel1: no visible global function definition for 'points'
    pairsrp : panel1: no visible global function definition for 'abline'
    pairsrp : panel1: no visible global function definition for 'lm'
    pairsrp : panel1: no visible global function definition for 'lines'
    pairsrp : panel1: no visible global function definition for 'lowess'
    pairsrp : panel2: no visible global function definition for 'cor.test'
    pairsrp : panel2: no visible global function definition for 'par'
    pairsrp : panel2: no visible global function definition for 'grey'
    pairsrp : panel2: no visible global function definition for 'strwidth'
    pairsrp : panel2: no visible global function definition for 'text'
    pairsrp: no visible global function definition for 'pairs'
    pairsrp: no visible binding for global variable 'points'
    pairsrp: no visible global function definition for 'strwidth'
    pclig: no visible global function definition for 'na.omit'
    piankabioboot: no visible global function definition for 'quantile'
    plot.correlog: no visible global function definition for 'plot'
    plot.correlog: no visible global function definition for 'axis'
    plot.correlog: no visible global function definition for 'points'
    postxt: no visible global function definition for 'par'
    rmls: no visible global function definition for 'select.list'
    rmls: no visible global function definition for 'winDialog'
    rwhatbufCat: no visible global function definition for 'flush.console'
    rwhatbufCat2: no visible global function definition for 'flush.console'
    rwhatbufNum: no visible global function definition for 'flush.console'
    selMod.list: no visible global function definition for 'residuals'
    selMod.list: no visible global function definition for 'AIC'
    selMod.list: no visible global function definition for 'logLik'
    selMod.list: no visible global function definition for 'formula'
    selMod.lm: no visible global function definition for 'terms'
    selMod.lm: no visible global function definition for 'update'
    selMod.lm: no visible global function definition for 'formula'
    selMod.lm: no visible global function definition for 'anova'
    trans2seg: no visible global function definition for 'na.omit'
    valchisq: no visible global function definition for 'chisq.test'
    write.delim: no visible global function definition for 'write.table'
    Undefined global functions or variables:
     AIC abline anova axis chisq.test cor.test dist family flush.console
     formula grey ks.test lines lm logLik lowess model.frame na.omit
     nclass.FD nclass.Sturges nclass.scott pairs par plot points prop.test
     qnorm quantile read.delim residuals sd segments select.list strwidth
     terms text update winDialog write.table
    Consider adding
     importFrom("grDevices", "grey", "nclass.FD", "nclass.Sturges",
     "nclass.scott")
     importFrom("graphics", "abline", "axis", "lines", "pairs", "par",
     "plot", "points", "segments", "strwidth", "text")
     importFrom("stats", "AIC", "anova", "chisq.test", "cor.test", "dist",
     "family", "formula", "ks.test", "lm", "logLik", "lowess",
     "model.frame", "na.omit", "prop.test", "qnorm", "quantile",
     "residuals", "sd", "terms", "update")
     importFrom("utils", "flush.console", "read.delim", "select.list",
     "winDialog", "write.table")
    to your NAMESPACE.
Flavor: r-devel-windows-ix86+x86_64