pegas: Population and Evolutionary Genetics Analysis System

pegas provides functions for reading, writing, plotting, analysing, and manipulating allelic and haplotypic data, and for the analysis of population nucleotide sequences and micro-satellites including coalescence analyses.

Version: 0.5-1
Depends: R (≥ 2.6.0), ape (≥ 2.4), adegenet
Imports: graphics, utils
Published: 2014-01-10
Author: Emmanuel Paradis [aut, cre, cph], Klaus Schliep [aut, cph], Alastair Potts [aut, cph], David Winter [aut, cph]
Maintainer: Emmanuel Paradis <Emmanuel.Paradis at ird.fr>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: http://ape-package.ird.fr/pegas/
NeedsCompilation: no
Citation: pegas citation info
Materials: NEWS
CRAN checks: pegas results

Downloads:

Reference manual: pegas.pdf
Vignettes: Reading Files
Package source: pegas_0.5-1.tar.gz
Windows binaries: r-devel: pegas_0.5-1.zip, r-release: pegas_0.5-1.zip, r-oldrel: pegas_0.5-1.zip
OS X Snow Leopard binaries: r-release: pegas_0.5-1.tgz, r-oldrel: pegas_0.5-1.tgz
OS X Mavericks binaries: r-release: pegas_0.5-1.tgz
Old sources: pegas archive

Reverse dependencies:

Reverse depends: mmod, spider, StAMPP
Reverse imports: PopGenReport, poppr
Reverse suggests: adegenet